Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05444680_1327 | Not Available | Positive | 7241236 - 7241568 | 12613.0 |
| protein of unknown function | SAMN05444680_1328 | Not Available | Positive | 7241650 - 7241808 | 5577.41 |
| hypothetical protein | SAMN05444680_1329 | Not Available | Positive | 7241868 - 7242011 | 5089.07 |
| hypothetical protein | SAMN05444680_13210 | Not Available | Positive | 7242357 - 7243484 | 40199.0 |
| hypothetical protein | SAMN05444680_13211 | Not Available | Positive | 7245893 - 7246129 | 8591.24 |
| formate hydrogenlyase subunit 3/multisubunit na+/h+ antiporter, mnhd subunit | SAMN05444680_13212 | Not Available | Positive | 7246133 - 7248157 | 72322.7 |
| formate hydrogenlyase subunit 4 | SAMN05444680_13213 | Not Available | Positive | 7248162 - 7249109 | 34040.7 |
| hydrogenase-4 component e | SAMN05444680_13214 | Not Available | Positive | 7249121 - 7249780 | 24039.7 |
| hydrogenase-4 component f | SAMN05444680_13215 | Not Available | Positive | 7249785 - 7251242 | 52119.2 |
| ni,fe-hydrogenase iii large subunit | SAMN05444680_13216 | Not Available | Positive | 7251247 - 7252800 | 56031.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
