Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin co-regulated pilus biosynthesis protein q | SAMN05444680_13134 | Not Available | Negative | 7223039 - 7223875 | 29464.3 |
| hypothetical protein | SAMN05444680_13135 | Not Available | Positive | 7224251 - 7224676 | 15359.5 |
| carotenoid cleavage dioxygenase | SAMN05444680_13136 | Not Available | Negative | 7225360 - 7226805 | 53099.4 |
| signal transduction histidine kinase | SAMN05444680_13137 | Not Available | Negative | 7226807 - 7228270 | 54246.3 |
| two-component system, narl family, response regulator desr | SAMN05444680_13138 | Not Available | Negative | 7228270 - 7228608 | 12059.7 |
| putative sos response-associated peptidase yedk | SAMN05444680_13139 | Not Available | Negative | 7230017 - 7230778 | 29065.6 |
| dna binding domain-containing protein, excisionase family | SAMN05444680_13140 | Not Available | Positive | 7231402 - 7231872 | 17595.3 |
| pin domain-containing protein | SAMN05444680_13141 | Not Available | Positive | 7231872 - 7232453 | 21090.4 |
| hypothetical protein | SAMN05444680_13142 | Not Available | Negative | 7232562 - 7232774 | 7777.56 |
| alkane 1-monooxygenase | SAMN05444680_13143 | Not Available | Negative | 7233576 - 7234790 | 46154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
