Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_13124 | Not Available | Negative | 7213495 - 7213836 | 12468.1 |
| hypothetical protein | SAMN05444680_13125 | Not Available | Negative | 7213829 - 7214065 | 8753.86 |
| type iv secretion system protein virb5 | SAMN05444680_13126 | Not Available | Negative | 7214084 - 7214770 | 24724.2 |
| type iv secretion system protein virb4 | SAMN05444680_13127 | Not Available | Negative | 7214767 - 7217445 | 101744.0 |
| type iv secretion system protein virb3 | SAMN05444680_13128 | Not Available | Negative | 7217432 - 7217731 | 11141.9 |
| type iv secretion system protein virb2 | SAMN05444680_13129 | Not Available | Negative | 7217738 - 7218121 | 13279.1 |
| hypothetical protein | SAMN05444680_13130 | Not Available | Negative | 7218186 - 7218725 | 19553.8 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN05444680_13131 | Not Available | Negative | 7218737 - 7219798 | 36417.4 |
| ompa family protein | SAMN05444680_13132 | Not Available | Negative | 7219897 - 7220922 | 36271.9 |
| head domain of trimeric autotransporter adhesin | SAMN05444680_13133 | Not Available | Negative | 7220935 - 7222788 | 59369.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
