Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pld-like domain-containing protein | SAMN05444680_13114 | Not Available | Negative | 7206266 - 7206868 | 21308.3 |
| hypothetical protein | SAMN05444680_13115 | Not Available | Negative | 7206865 - 7207227 | 12992.8 |
| hypothetical protein | SAMN05444680_13116 | Not Available | Negative | 7207227 - 7207514 | 10204.0 |
| type iv secretion system protein virb1 | SAMN05444680_13117 | Not Available | Negative | 7207569 - 7208429 | 30366.7 |
| hypothetical protein | SAMN05444680_13118 | Not Available | Positive | 7208505 - 7208732 | 8190.13 |
| type iv secretion system protein virb11 | SAMN05444680_13119 | Not Available | Negative | 7208764 - 7209786 | 38909.6 |
| type iv secretion system protein virb10 | SAMN05444680_13120 | Not Available | Negative | 7209798 - 7211027 | 43520.5 |
| type iv secretion system protein virb9 | SAMN05444680_13121 | Not Available | Negative | 7211027 - 7211887 | 31128.8 |
| type iv secretion system protein virb8 | SAMN05444680_13122 | Not Available | Negative | 7211943 - 7212611 | 24472.1 |
| type iv secretion system protein virb6 | SAMN05444680_13123 | Not Available | Negative | 7212608 - 7213492 | 31257.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
