Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05444680_13032 | Not Available | Positive | 7176393 - 7176638 | 8304.45 |
| hypothetical protein | SAMN05444680_13033 | Not Available | Positive | 7176658 - 7176999 | 13098.8 |
| divalent cation tolerance protein | SAMN05444680_13034 | Not Available | Positive | 7177023 - 7177358 | 12595.0 |
| broad specificity phosphatase phoe | SAMN05444680_13035 | Not Available | Negative | 7177349 - 7178023 | 24888.6 |
| protein of unknown function | SAMN05444680_13036 | Not Available | Positive | 7178282 - 7179082 | 29134.1 |
| pas domain s-box-containing protein | SAMN05444680_13037 | Not Available | Positive | 7179142 - 7181814 | 97267.1 |
| two component transcriptional regulator, luxr family | SAMN05444680_13038 | Not Available | Negative | 7181835 - 7182476 | 22933.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444680_13039 | Not Available | Negative | 7182667 - 7183299 | 22452.3 |
| glyoxalase-like domain-containing protein | SAMN05444680_13040 | Not Available | Negative | 7183301 - 7183987 | 24311.1 |
| phenazine biosynthesis protein phzf family | SAMN05444680_13041 | Not Available | Negative | 7183995 - 7184903 | 32352.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
