Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05444680_13012 | Not Available | Positive | 7148903 - 7150195 | 46898.4 |
| protein of unknown function | SAMN05444680_13013 | Not Available | Positive | 7150221 - 7150814 | 22256.7 |
| signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation | SAMN05444680_13014 | Not Available | Positive | 7150811 - 7153135 | 82925.0 |
| response regulator receiver domain-containing protein | SAMN05444680_13015 | Not Available | Positive | 7153214 - 7153909 | 25156.1 |
| Trna-phe | Not Available | Not Available | Positive | 7153928 - 7154003 | Not Available |
| ammonium transporter | SAMN05444680_13017 | Not Available | Positive | 7154217 - 7155419 | 41771.3 |
| phospholipase a1 | SAMN05444680_13018 | Not Available | Negative | 7155424 - 7156611 | 44143.0 |
| hypothetical protein | SAMN05444680_13019 | Not Available | Negative | 7156608 - 7157078 | 15938.7 |
| atp-dependent dna helicase rep | SAMN05444680_13020 | Not Available | Negative | 7157075 - 7159171 | 77996.8 |
| hypothetical protein | SAMN05444680_13021 | Not Available | Positive | 7159319 - 7160338 | 34716.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
