Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 7135847 - 7135922 | Not Available |
| protein translocase subunit sece/sec61 gamma | SAMN05444680_1303 | Not Available | Positive | 7136025 - 7136408 | 14000.2 |
| transcription antitermination protein nusg | SAMN05444680_1304 | Not Available | Positive | 7136408 - 7137004 | 22454.8 |
| lsu ribosomal protein l11p | SAMN05444680_1305 | Not Available | Positive | 7137156 - 7137587 | 15089.8 |
| lsu ribosomal protein l1p | SAMN05444680_1306 | Not Available | Positive | 7137588 - 7138286 | 23903.2 |
| lsu ribosomal protein l10p | SAMN05444680_1307 | Not Available | Positive | 7138536 - 7139069 | 18340.2 |
| lsu ribosomal protein l12p | SAMN05444680_1308 | Not Available | Positive | 7139113 - 7139487 | 12679.3 |
| dna-directed rna polymerase subunit beta | SAMN05444680_1309 | Not Available | Positive | 7139737 - 7143861 | 153188.0 |
| dna-directed rna polymerase subunit beta' | SAMN05444680_13010 | Not Available | Positive | 7143883 - 7148118 | 154679.0 |
| lema protein | SAMN05444680_13011 | Not Available | Positive | 7148206 - 7148796 | 20937.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
