Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN05444680_12953 | Not Available | Negative | 7125349 - 7126836 | 52490.3 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN05444680_12954 | Not Available | Negative | 7126833 - 7127132 | 10822.9 |
| rod shape-determining protein mreb | SAMN05444680_12955 | Not Available | Positive | 7127359 - 7128402 | 36821.9 |
| rod shape-determining protein mrec | SAMN05444680_12956 | Not Available | Positive | 7128474 - 7129475 | 35505.7 |
| rod shape-determining protein mred | SAMN05444680_12957 | Not Available | Positive | 7129472 - 7129993 | 19037.2 |
| penicillin-binding protein 2 | SAMN05444680_12958 | Not Available | Positive | 7130171 - 7132147 | 71462.4 |
| hypothetical protein | SAMN05444680_12959 | Not Available | Negative | 7132158 - 7132916 | 26685.4 |
| choline dehydrogenase | SAMN05444680_12960 | Not Available | Negative | 7133236 - 7134873 | 60201.1 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN05444680_12961 | Not Available | Negative | 7134930 - 7135682 | 27207.8 |
| elongation factor tu | SAMN05444680_1301 | Not Available | Positive | 7135683 - 7135832 | 5198.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
