Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside abc transporter atp-binding protein | SAMN05444680_12943 | Not Available | Positive | 7115212 - 7116822 | 57724.9 |
| nicotinamidase-related amidase | SAMN05444680_12944 | Not Available | Positive | 7116839 - 7117504 | 23914.9 |
| dna-binding transcriptional regulator, gntr family | SAMN05444680_12945 | Not Available | Positive | 7117566 - 7118261 | 26778.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12946 | Not Available | Negative | 7118344 - 7119306 | 33727.3 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444680_12947 | Not Available | Negative | 7119339 - 7120598 | 45860.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_12948 | Not Available | Positive | 7120704 - 7121609 | 33117.1 |
| exodeoxyribonuclease-3 | SAMN05444680_12949 | Not Available | Negative | 7121613 - 7122416 | 30234.9 |
| orotate phosphoribosyltransferase | SAMN05444680_12950 | Not Available | Positive | 7122430 - 7123113 | 24175.8 |
| protein of unknown function | SAMN05444680_12951 | Not Available | Positive | 7123132 - 7123821 | 25542.7 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | SAMN05444680_12952 | Not Available | Negative | 7123846 - 7125333 | 53898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
