Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system substrate-binding protein | SAMN05444680_12933 | Not Available | Positive | 7106524 - 7107537 | 35344.7 |
| nitt/taut family transport system permease protein | SAMN05444680_12934 | Not Available | Positive | 7107542 - 7108372 | 29432.7 |
| nitt/taut family transport system atp-binding protein | SAMN05444680_12935 | Not Available | Positive | 7108369 - 7109202 | 31401.1 |
| protein of unknown function | SAMN05444680_12936 | Not Available | Positive | 7109214 - 7109420 | 7368.78 |
| amidase/aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444680_12937 | Not Available | Positive | 7109417 - 7110841 | 49898.1 |
| protein of unknown function | SAMN05444680_12938 | Not Available | Positive | 7110853 - 7111233 | 14118.7 |
| nucleoside-binding protein | SAMN05444680_12939 | Not Available | Positive | 7111343 - 7112458 | 39722.8 |
| nucleoside abc transporter membrane protein | SAMN05444680_12940 | Not Available | Positive | 7112489 - 7113574 | 36919.9 |
| nucleoside abc transporter membrane protein | SAMN05444680_12941 | Not Available | Positive | 7113571 - 7114491 | 31304.9 |
| nicotinamidase-related amidase | SAMN05444680_12942 | Not Available | Positive | 7114488 - 7115195 | 25376.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
