Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-finger domain-containing protein | SAMN05444680_12923 | Not Available | Positive | 7095489 - 7095701 | 7584.16 |
| hypothetical protein | SAMN05444680_12924 | Not Available | Positive | 7095707 - 7096144 | 15724.9 |
| o-antigen ligase | SAMN05444680_12925 | Not Available | Negative | 7096163 - 7097365 | 43999.9 |
| signal transduction histidine kinase | SAMN05444680_12926 | Not Available | Negative | 7097542 - 7098741 | 43532.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444680_12927 | Not Available | Negative | 7098750 - 7099463 | 26167.7 |
| dehydrogenase (flavoprotein) | SAMN05444680_12928 | Not Available | Negative | 7099566 - 7101194 | 61541.1 |
| beta-ketoacyl synthase, n-terminal domain | SAMN05444680_12929 | Not Available | Negative | 7101202 - 7102008 | 27629.9 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | SAMN05444680_12930 | Not Available | Negative | 7102005 - 7103216 | 42069.8 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN05444680_12931 | Not Available | Negative | 7103298 - 7104668 | 48415.8 |
| allophanate hydrolase | SAMN05444680_12932 | Not Available | Positive | 7104792 - 7106486 | 58779.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
