Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12913 | Not Available | Positive | 7083697 - 7084665 | 34287.8 |
| amidohydrolase, pncc family | SAMN05444680_12914 | Not Available | Negative | 7084767 - 7085411 | 22028.4 |
| nhl repeat-containing protein | SAMN05444680_12915 | Not Available | Positive | 7085519 - 7086637 | 40728.9 |
| kelch motif-containing protein | SAMN05444680_12916 | Not Available | Negative | 7086807 - 7088762 | 65151.9 |
| hth-type transcriptional regulator / antitoxin hipb | SAMN05444680_12917 | Not Available | Positive | 7088970 - 7089242 | 9887.95 |
| serine/threonine-protein kinase hipa | SAMN05444680_12918 | Not Available | Positive | 7089246 - 7090595 | 49668.9 |
| pas domain s-box-containing protein | SAMN05444680_12919 | Not Available | Negative | 7090621 - 7092687 | 74847.6 |
| hypothetical protein | SAMN05444680_12920 | Not Available | Positive | 7092819 - 7093301 | 17032.8 |
| recombination associated protein rdgc | SAMN05444680_12921 | Not Available | Negative | 7093317 - 7094309 | 35926.5 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05444680_12922 | Not Available | Positive | 7094545 - 7095483 | 34523.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
