Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | SAMN05444680_1292 | Not Available | Negative | 7072279 - 7073031 | 27752.2 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | SAMN05444680_1293 | Not Available | Negative | 7073028 - 7073648 | 21964.5 |
| homoprotocatechuate degradation operon regulator, hpar | SAMN05444680_1294 | Not Available | Negative | 7073645 - 7074076 | 16338.8 |
| pld-like domain-containing protein | SAMN05444680_1295 | Not Available | Negative | 7074182 - 7076014 | 66496.8 |
| uncharacterized conserved protein, mapeg superfamily | SAMN05444680_1296 | Not Available | Negative | 7076149 - 7076544 | 14256.8 |
| dna replication and repair protein rada | SAMN05444680_1297 | Not Available | Positive | 7076651 - 7078042 | 48556.9 |
| ahpc/tsa family protein | SAMN05444680_1298 | Not Available | Negative | 7078054 - 7078734 | 24394.2 |
| arac-type dna-binding protein | SAMN05444680_1299 | Not Available | Positive | 7079321 - 7080304 | 36030.9 |
| pkd domain-containing protein | SAMN05444680_12910 | Not Available | Positive | 7080372 - 7082483 | 72430.6 |
| hypothetical protein | SAMN05444680_12912 | Not Available | Positive | 7082786 - 7083139 | 13140.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
