Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SAMN05444680_12833 | Not Available | Positive | 7041092 - 7041868 | 27396.8 |
| transcriptional regulator, tetr family | SAMN05444680_12834 | Not Available | Negative | 7041879 - 7042517 | 23134.8 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_12835 | Not Available | Positive | 7042542 - 7043792 | 43073.4 |
| protein sco1/2 | SAMN05444680_12836 | Not Available | Negative | 7044368 - 7045012 | 23299.7 |
| cytochrome c | SAMN05444680_12837 | Not Available | Negative | 7045022 - 7045609 | 20602.7 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN05444680_12838 | Not Available | Negative | 7045618 - 7046220 | 21755.2 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN05444680_12839 | Not Available | Negative | 7046210 - 7047862 | 60448.2 |
| arac-type dna-binding protein | SAMN05444680_12840 | Not Available | Positive | 7048000 - 7048965 | 35122.9 |
| major facilitator superfamily protein | SAMN05444680_12841 | Not Available | Negative | 7048951 - 7050519 | 56294.8 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_12842 | Not Available | Negative | 7050527 - 7051738 | 43040.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
