Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2 | SAMN05444680_12823 | Not Available | Positive | 7028284 - 7029837 | 58687.0 |
| riboflavin kinase / fmn adenylyltransferase | SAMN05444680_12824 | Not Available | Positive | 7029872 - 7030789 | 31846.2 |
| maleylacetate reductase | SAMN05444680_12825 | Not Available | Positive | 7030786 - 7031859 | 37157.9 |
| hydroxyquinol 1,2-dioxygenase | SAMN05444680_12826 | Not Available | Positive | 7031899 - 7032792 | 32719.7 |
| pyruvate dehydrogenase e1 component | SAMN05444680_12827 | Not Available | Negative | 7032750 - 7035461 | 101104.0 |
| nadh-quinone oxidoreductase subunit f | SAMN05444680_12828 | Not Available | Positive | 7035666 - 7037012 | 48518.1 |
| arac-type dna-binding protein | SAMN05444680_12829 | Not Available | Positive | 7037133 - 7037897 | 27698.1 |
| arac-type dna-binding protein | SAMN05444680_12830 | Not Available | Positive | 7038013 - 7039017 | 37049.5 |
| helix-turn-helix domain-containing protein | SAMN05444680_12831 | Not Available | Positive | 7039019 - 7039984 | 35220.2 |
| arac-binding-like domain-containing protein | SAMN05444680_12832 | Not Available | Positive | 7040106 - 7041053 | 34753.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
