Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | SAMN05444680_12813 | Not Available | Negative | 7017377 - 7018312 | 33885.1 |
| muconate cycloisomerase | SAMN05444680_12814 | Not Available | Negative | 7018362 - 7019549 | 42362.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_12815 | Not Available | Positive | 7019693 - 7020673 | 36617.3 |
| hypothetical protein | SAMN05444680_12816 | Not Available | Positive | 7020873 - 7020995 | 4407.2 |
| hippurate hydrolase | SAMN05444680_12817 | Not Available | Positive | 7021348 - 7022610 | 44898.8 |
| uncharacterized membrane protein yeih | SAMN05444680_12818 | Not Available | Positive | 7022607 - 7023263 | 23084.5 |
| transcriptional regulator, lysr family | SAMN05444680_12819 | Not Available | Negative | 7023908 - 7024861 | 35124.0 |
| uncharacterized conserved protein | SAMN05444680_12820 | Not Available | Positive | 7025119 - 7026105 | 35866.1 |
| mfs transporter, aahs family, 4-hydroxybenzoate transporter | SAMN05444680_12821 | Not Available | Positive | 7026153 - 7027532 | 47306.9 |
| flavin reductase (nadh)/flavin reductase/chlorophenol-4-monooxygenase component 1 | SAMN05444680_12822 | Not Available | Positive | 7027640 - 7028236 | 21103.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
