Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate enol-lactonase | SAMN05444680_1283 | Not Available | Negative | 7008486 - 7009280 | 27456.4 |
| 3-oxoadipyl-coa thiolase | SAMN05444680_1284 | Not Available | Negative | 7009326 - 7010531 | 41683.2 |
| 3-oxoadipate coa-transferase beta subunit | SAMN05444680_1285 | Not Available | Negative | 7010565 - 7011233 | 23265.2 |
| 3-oxoadipate coa-transferase alpha subunit | SAMN05444680_1286 | Not Available | Negative | 7011230 - 7011928 | 24488.7 |
| hypothetical protein | SAMN05444680_1287 | Not Available | Negative | 7011960 - 7012136 | 6126.54 |
| mfs transporter, aahs family, benzoate transport protein | SAMN05444680_1288 | Not Available | Negative | 7012195 - 7013556 | 47701.4 |
| 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase | SAMN05444680_1289 | Not Available | Negative | 7013582 - 7014376 | 28018.3 |
| benzoate/toluate 1,2-dioxygenase reductase subunit | SAMN05444680_12810 | Not Available | Negative | 7014373 - 7015392 | 36630.8 |
| benzoate/toluate 1,2-dioxygenase beta subunit | SAMN05444680_12811 | Not Available | Negative | 7015411 - 7015902 | 19287.5 |
| benzoate/toluate 1,2-dioxygenase alpha subunit | SAMN05444680_12812 | Not Available | Negative | 7015899 - 7017263 | 51197.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
