Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101613 | Not Available | Negative | 639090 - 639305 | 7762.32 |
| Trna-ser | Not Available | Not Available | Positive | 639479 - 639571 | Not Available |
| aspartate kinase | SAMN05444680_101615 | Not Available | Negative | 639594 - 640862 | 45476.4 |
| trna(ile)-lysidine synthase | SAMN05444680_101616 | Not Available | Negative | 640961 - 641911 | 34154.6 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05444680_101617 | Not Available | Negative | 641951 - 642931 | 36316.4 |
| dna-3-methyladenine glycosylase ii | SAMN05444680_101618 | Not Available | Negative | 642948 - 643616 | 25015.4 |
| cysteinyl-trna synthetase | SAMN05444680_101619 | Not Available | Negative | 643613 - 644992 | 50788.4 |
| tetratricopeptide repeat-containing protein | SAMN05444680_101620 | Not Available | Positive | 645185 - 645766 | 20918.0 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN05444680_101621 | Not Available | Positive | 645818 - 646411 | 21124.3 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05444680_101622 | Not Available | Positive | 646427 - 646936 | 18454.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
