Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_12748 | Not Available | Negative | 6988252 - 6988584 | 12150.7 |
| protein of unknown function | SAMN05444680_12749 | Not Available | Negative | 6988836 - 6989372 | 19159.8 |
| nadph:quinone reductase | SAMN05444680_12750 | Not Available | Negative | 6989670 - 6990680 | 36815.5 |
| adenylate cyclase, class 3 | SAMN05444680_12751 | Not Available | Negative | 6991136 - 6992461 | 48404.5 |
| hypothetical protein | SAMN05444680_12752 | Not Available | Positive | 6992513 - 6992701 | 6637.67 |
| cyclic nucleotide-binding domain-containing protein | SAMN05444680_12753 | Not Available | Negative | 6992720 - 6993976 | 44496.3 |
| pyruvate, water dikinase | SAMN05444680_12754 | Not Available | Negative | 6993973 - 6995613 | 58884.7 |
| uncharacterized conserved protein, duf1330 family | SAMN05444680_12755 | Not Available | Negative | 6995859 - 6996146 | 10834.0 |
| adenylate/guanylate cyclase | SAMN05444680_12756 | Not Available | Negative | 6996279 - 6999497 | 116862.0 |
| transcriptional regulator, asnc family | SAMN05444680_12757 | Not Available | Negative | 6999652 - 7000131 | 17734.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
