Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_12738 | Not Available | Negative | 6978137 - 6978589 | 16752.4 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444680_12739 | Not Available | Positive | 6979005 - 6979811 | 30125.8 |
| hypothetical protein | SAMN05444680_12740 | Not Available | Positive | 6979988 - 6980134 | 5273.63 |
| hypothetical protein | SAMN05444680_12741 | Not Available | Positive | 6980511 - 6980705 | 6647.23 |
| hypothetical protein | SAMN05444680_12742 | Not Available | Positive | 6981125 - 6981760 | 22651.3 |
| adenylate cyclase | SAMN05444680_12743 | Not Available | Negative | 6981843 - 6983546 | 62540.9 |
| protein of unknown function | SAMN05444680_12744 | Not Available | Negative | 6983656 - 6984183 | 18489.9 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN05444680_12745 | Not Available | Positive | 6984494 - 6985744 | 45794.6 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN05444680_12746 | Not Available | Positive | 6985762 - 6986775 | 36766.0 |
| branched-chain alpha-keto acid dehydrogenase e2 component | SAMN05444680_12747 | Not Available | Positive | 6986777 - 6988033 | 44412.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
