Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_12728 | Not Available | Positive | 6969514 - 6970212 | 24405.6 |
| predicted zn-dependent peptidase | SAMN05444680_12729 | Not Available | Negative | 6970328 - 6971650 | 47220.6 |
| helix-turn-helix domain-containing protein | SAMN05444680_12730 | Not Available | Negative | 6971654 - 6971911 | 8677.54 |
| hypothetical protein | SAMN05444680_12731 | Not Available | Negative | 6971989 - 6972207 | 7476.21 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_12732 | Not Available | Positive | 6972238 - 6973041 | 27710.6 |
| hypothetical protein | SAMN05444680_12733 | Not Available | Negative | 6973298 - 6973813 | 18773.3 |
| nadph:quinone reductase | SAMN05444680_12734 | Not Available | Negative | 6974084 - 6975085 | 36012.8 |
| hypothetical protein | SAMN05444680_12735 | Not Available | Negative | 6975121 - 6975909 | 27964.9 |
| n-ethylmaleimide reductase | SAMN05444680_12736 | Not Available | Negative | 6975955 - 6977049 | 38643.6 |
| transcriptional regulator, tetr family | SAMN05444680_12737 | Not Available | Positive | 6977212 - 6977844 | 22020.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
