Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN05444680_1278 | Not Available | Negative | 6946566 - 6950261 | 133480.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_1279 | Not Available | Positive | 6950406 - 6951284 | 32777.2 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444680_12710 | Not Available | Positive | 6951370 - 6951849 | 17963.4 |
| phosphate acetyltransferase | SAMN05444680_12711 | Not Available | Positive | 6952000 - 6952941 | 32812.1 |
| acetate kinase | SAMN05444680_12712 | Not Available | Positive | 6952938 - 6954128 | 42453.0 |
| hypothetical protein | SAMN05444680_12713 | Not Available | Positive | 6954216 - 6954521 | 11666.3 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444680_12714 | Not Available | Positive | 6954589 - 6955155 | 20928.0 |
| protein of unknown function | SAMN05444680_12715 | Not Available | Positive | 6955167 - 6957608 | 90236.7 |
| enoyl-[acyl-carrier-protein] reductase | SAMN05444680_12716 | Not Available | Positive | 6957605 - 6958387 | 27682.6 |
| hypothetical protein | SAMN05444680_12717 | Not Available | Negative | 6958397 - 6958894 | 18350.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
