Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444680_12663 | Not Available | Negative | 6937311 - 6938231 | 33863.6 |
| beta-alanine--pyruvate transaminase | SAMN05444680_12664 | Not Available | Positive | 6938337 - 6939680 | 48475.0 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN05444680_12665 | Not Available | Positive | 6939723 - 6940057 | 11896.1 |
| hypothetical protein | SAMN05444680_1271 | Not Available | Positive | 6940060 - 6940350 | 10010.2 |
| surface antigen | SAMN05444680_1272 | Not Available | Negative | 6940866 - 6942032 | 42526.5 |
| hypothetical protein | SAMN05444680_1273 | Not Available | Positive | 6942260 - 6943150 | 31706.4 |
| hypothetical protein | SAMN05444680_1274 | Not Available | Positive | 6943196 - 6944266 | 39562.0 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05444680_1275 | Not Available | Positive | 6944300 - 6945181 | 32183.2 |
| adenylate cyclase, class 3 | SAMN05444680_1276 | Not Available | Negative | 6945178 - 6946230 | 38364.6 |
| hpt domain-containing protein | SAMN05444680_1277 | Not Available | Negative | 6946223 - 6946564 | 12065.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
