Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | SAMN05444680_12653 | Not Available | Negative | 6925518 - 6925781 | 9582.15 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05444680_12654 | Not Available | Positive | 6926118 - 6927557 | 50298.2 |
| predicted methyltransferase | SAMN05444680_12655 | Not Available | Positive | 6927681 - 6928511 | 28875.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12656 | Not Available | Negative | 6928559 - 6929518 | 33357.4 |
| argininosuccinate lyase | SAMN05444680_12657 | Not Available | Negative | 6929515 - 6931062 | 55308.8 |
| lysr family transcriptional regulator, cys regulon transcriptional activator | SAMN05444680_12658 | Not Available | Positive | 6931120 - 6932052 | 34273.1 |
| acetyltransferase | SAMN05444680_12659 | Not Available | Negative | 6932104 - 6934899 | 99729.4 |
| hypothetical protein | SAMN05444680_12660 | Not Available | Positive | 6934979 - 6935101 | 4247.26 |
| hypothetical protein | SAMN05444680_12661 | Not Available | Positive | 6935248 - 6935508 | 9337.46 |
| amidase | SAMN05444680_12662 | Not Available | Positive | 6935832 - 6937307 | 53273.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
