Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444680_12643 | Not Available | Positive | 6913605 - 6914522 | 33588.4 |
| outer membrane protein, multidrug efflux system | SAMN05444680_12644 | Not Available | Negative | 6914519 - 6915979 | 50870.5 |
| multidrug efflux pump | SAMN05444680_12645 | Not Available | Negative | 6915983 - 6919135 | 111664.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_12646 | Not Available | Negative | 6919137 - 6920309 | 40774.4 |
| hypothetical protein | SAMN05444680_12647 | Not Available | Negative | 6920354 - 6920512 | 5539.48 |
| transcriptional regulator, tetr family | SAMN05444680_12648 | Not Available | Positive | 6920522 - 6921001 | 17895.7 |
| cu and ag efflux protein cusf | SAMN05444680_12649 | Not Available | Negative | 6921060 - 6921440 | 13703.4 |
| uncharacterized copper-binding protein, cupredoxin-like subfamily | SAMN05444680_12650 | Not Available | Negative | 6921437 - 6921937 | 18175.1 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN05444680_12651 | Not Available | Negative | 6921961 - 6923328 | 49920.2 |
| outer membrane protein tolc | SAMN05444680_12652 | Not Available | Negative | 6923343 - 6924794 | 52977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
