Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444680_12623 | Not Available | Negative | 6884796 - 6885710 | 33386.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12624 | Not Available | Positive | 6885818 - 6886804 | 34204.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_12625 | Not Available | Positive | 6886857 - 6887639 | 28954.3 |
| acetyl esterase | SAMN05444680_12626 | Not Available | Positive | 6887827 - 6888150 | 11464.9 |
| amidohydrolase | SAMN05444680_12627 | Not Available | Negative | 6888198 - 6888626 | 15216.2 |
| beta-glucosidase | SAMN05444680_12628 | Not Available | Negative | 6889176 - 6891320 | 76648.5 |
| hypothetical protein | SAMN05444680_12629 | Not Available | Positive | 6891449 - 6892744 | 48416.2 |
| glucoamylase | SAMN05444680_12630 | Not Available | Positive | 6892741 - 6894132 | 50679.6 |
| putative atp-binding cassette transporter | SAMN05444680_12631 | Not Available | Positive | 6894129 - 6895889 | 64436.2 |
| hypothetical protein | SAMN05444680_12632 | Not Available | Positive | 6895886 - 6898171 | 85970.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
