Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, fadr family | SAMN05444680_1263 | Not Available | Positive | 6866733 - 6867596 | 31563.8 |
| ompa-ompf porin, oop family | SAMN05444680_1264 | Not Available | Negative | 6867603 - 6868694 | 39699.0 |
| hypothetical protein | SAMN05444680_1265 | Not Available | Positive | 6869055 - 6869171 | 3840.81 |
| dihydroxyacetone kinase dhak subunit | SAMN05444680_1266 | Not Available | Negative | 6869288 - 6870277 | 34455.6 |
| dihydroxyacetone kinase dhal subunit | SAMN05444680_1267 | Not Available | Negative | 6870310 - 6870942 | 21551.9 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444680_1268 | Not Available | Negative | 6870965 - 6871999 | 37606.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444680_1269 | Not Available | Negative | 6871992 - 6873116 | 40665.9 |
| hypothetical protein | SAMN05444680_12610 | Not Available | Negative | 6873199 - 6873417 | 8001.15 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444680_12611 | Not Available | Negative | 6873414 - 6874373 | 34799.1 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444680_12612 | Not Available | Negative | 6874389 - 6875345 | 35573.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
