Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | SAMN05444680_12570 | Not Available | Negative | 6859492 - 6860829 | 48629.5 |
| putative oxidoreductase | SAMN05444680_12571 | Not Available | Negative | 6860845 - 6861339 | 17650.8 |
| uncharacterized membrane protein | SAMN05444680_12572 | Not Available | Negative | 6861350 - 6861655 | 9964.76 |
| yxwgxw repeat-containing protein | SAMN05444680_12573 | Not Available | Negative | 6862165 - 6862563 | 14436.2 |
| replication region dna-binding n-term | SAMN05444680_12574 | Not Available | Positive | 6862696 - 6862989 | 10871.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_12575 | Not Available | Negative | 6862878 - 6863696 | 30075.7 |
| hypothetical protein | SAMN05444680_12576 | Not Available | Positive | 6863957 - 6864874 | 33504.9 |
| hypothetical protein | SAMN05444680_12577 | Not Available | Positive | 6864871 - 6865055 | 5761.95 |
| galactarate dehydratase | SAMN05444680_1261 | Not Available | Negative | 6865056 - 6865190 | 4822.89 |
| mfs transporter, acs family, hexuronate transporter | SAMN05444680_1262 | Not Available | Negative | 6865195 - 6866493 | 47085.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
