Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain protein | SAMN05444680_12560 | Not Available | Negative | 6846272 - 6846781 | 18224.9 |
| predicted atpase | SAMN05444680_12561 | Not Available | Positive | 6846961 - 6852039 | 184152.0 |
| pas domain s-box-containing protein | SAMN05444680_12562 | Not Available | Negative | 6851982 - 6853076 | 39752.4 |
| hypothetical protein | SAMN05444680_12563 | Not Available | Negative | 6853073 - 6854047 | 34886.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444680_12564 | Not Available | Negative | 6854077 - 6854793 | 26897.3 |
| putative dna-binding domain-containing protein | SAMN05444680_12565 | Not Available | Negative | 6854790 - 6855566 | 28111.0 |
| hypothetical protein | SAMN05444680_12566 | Not Available | Negative | 6855550 - 6856407 | 31392.9 |
| hypothetical protein/toxin cpta | SAMN05444680_12567 | Not Available | Negative | 6856496 - 6857458 | 33518.9 |
| nte family protein | SAMN05444680_12568 | Not Available | Negative | 6857546 - 6858682 | 41374.3 |
| 3-hydroxybutyrate dehydrogenase | SAMN05444680_12569 | Not Available | Negative | 6858700 - 6859482 | 27707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
