Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hipa-like c-terminal domain-containing protein | SAMN05444680_12550 | Not Available | Positive | 6836037 - 6837161 | 40408.8 |
| hypothetical protein | SAMN05444680_12551 | Not Available | Positive | 6837520 - 6837831 | 10376.5 |
| h+/cl-antiporter clca | SAMN05444680_12552 | Not Available | Positive | 6838142 - 6839536 | 48128.4 |
| pentapeptide mxkdx repeat protein | SAMN05444680_12553 | Not Available | Negative | 6840236 - 6840535 | 10624.0 |
| dmso/tmao reductase yedyz, molybdopterin-dependent catalytic subunit | SAMN05444680_12554 | Not Available | Negative | 6840624 - 6841424 | 29742.6 |
| thiosulfate reductase cytochrome b subunit | SAMN05444680_12555 | Not Available | Negative | 6841421 - 6842047 | 23242.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444680_12556 | Not Available | Positive | 6842146 - 6842862 | 26856.5 |
| hamp domain-containing protein | SAMN05444680_12557 | Not Available | Positive | 6842859 - 6844322 | 53582.4 |
| hypothetical protein | SAMN05444680_12558 | Not Available | Positive | 6844529 - 6844759 | 8143.35 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN05444680_12559 | Not Available | Negative | 6844835 - 6846229 | 49780.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
