Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_12520 | Not Available | Positive | 6804770 - 6805234 | 16584.8 |
| putative abc transport system substrate-binding protein | SAMN05444680_12521 | Not Available | Negative | 6805773 - 6806750 | 34629.9 |
| macro domain-containing protein | SAMN05444680_12522 | Not Available | Negative | 6806947 - 6807315 | 13321.7 |
| protein of unknown function | SAMN05444680_12523 | Not Available | Positive | 6807335 - 6809341 | 72842.2 |
| hypothetical protein | SAMN05444680_12524 | Not Available | Positive | 6810739 - 6811287 | 20201.9 |
| hypothetical protein | SAMN05444680_12525 | Not Available | Positive | 6811386 - 6812099 | 25828.7 |
| hypothetical protein | SAMN05444680_12526 | Not Available | Positive | 6812110 - 6812496 | 13512.4 |
| hypothetical protein | SAMN05444680_12527 | Not Available | Positive | 6812493 - 6812798 | 10981.0 |
| hypothetical protein | SAMN05444680_12528 | Not Available | Negative | 6812846 - 6813088 | 8636.63 |
| single stranded dna-binding protein (ssb) | SAMN05444680_12529 | Not Available | Negative | 6813085 - 6813597 | 19351.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
