Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN05444680_101593 | Not Available | Positive | 619902 - 621050 | 39732.6 |
| multidrug efflux pump subunit acrb | SAMN05444680_101594 | Not Available | Positive | 621047 - 624178 | 112274.0 |
| hypothetical protein | SAMN05444680_101595 | Not Available | Positive | 624175 - 624600 | 14631.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_101596 | Not Available | Negative | 624604 - 625308 | 26062.5 |
| hypothetical protein | SAMN05444680_101597 | Not Available | Positive | 625436 - 625885 | 15793.4 |
| putative tricarboxylic transport membrane protein | SAMN05444680_101598 | Not Available | Negative | 625976 - 627481 | 52166.3 |
| putative tricarboxylic transport membrane protein | SAMN05444680_101599 | Not Available | Negative | 627486 - 628013 | 18506.6 |
| putative tricarboxylic transport membrane protein | SAMN05444680_101600 | Not Available | Negative | 628016 - 628975 | 33012.0 |
| two-component system, ompr family, response regulator tctd | SAMN05444680_101601 | Not Available | Positive | 629084 - 629764 | 24998.5 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05444680_101602 | Not Available | Positive | 629761 - 631176 | 51120.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
