Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12459 | Not Available | Negative | 6774783 - 6775760 | 34474.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_12460 | Not Available | Negative | 6775790 - 6776578 | 27833.2 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444680_12461 | Not Available | Negative | 6776624 - 6777535 | 32843.3 |
| hypothetical protein | SAMN05444680_12462 | Not Available | Negative | 6777546 - 6778220 | 23948.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_12463 | Not Available | Positive | 6778296 - 6779213 | 33558.1 |
| type iv secretion-system coupling protein dna-binding domain-containing protein | SAMN05444680_12464 | Not Available | Positive | 6779539 - 6780057 | 18662.9 |
| hypothetical protein | SAMN05444680_12465 | Not Available | Positive | 6780260 - 6781465 | 43638.8 |
| putative abc transport system substrate-binding protein | SAMN05444680_12466 | Not Available | Positive | 6781919 - 6782869 | 34136.1 |
| conjugative relaxase domain-containing protein, trwc/trai family | SAMN05444680_12467 | Not Available | Positive | 6783300 - 6786182 | 106364.0 |
| dna-binding protein h-ns | SAMN05444680_12468 | Not Available | Positive | 6786679 - 6787437 | 25607.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
