Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05444680_12449 | Not Available | Positive | 6763418 - 6764884 | 53635.5 |
| reactive intermediate/imine deaminase | SAMN05444680_12450 | Not Available | Positive | 6765308 - 6765682 | 13587.0 |
| hypothetical protein | SAMN05444680_12451 | Not Available | Negative | 6765749 - 6766159 | 14575.4 |
| fic/doc family protein | SAMN05444680_12452 | Not Available | Negative | 6766456 - 6767967 | 56643.6 |
| 2,5-diketo-d-gluconate reductase a | SAMN05444680_12453 | Not Available | Negative | 6768367 - 6769218 | 31835.1 |
| uncharacterized conserved protein, duf849 family | SAMN05444680_12454 | Not Available | Positive | 6769271 - 6770293 | 37192.3 |
| acyl-coa thioesterase | SAMN05444680_12455 | Not Available | Negative | 6770358 - 6770741 | 13592.5 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444680_12456 | Not Available | Negative | 6771104 - 6772891 | 64979.5 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05444680_12457 | Not Available | Negative | 6772940 - 6774406 | 52080.7 |
| cupin domain-containing protein | SAMN05444680_12458 | Not Available | Negative | 6774403 - 6774774 | 13812.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
