Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05444680_12439 | Not Available | Positive | 6751250 - 6752713 | 51746.1 |
| o-methyltransferase | SAMN05444680_12440 | Not Available | Positive | 6753286 - 6754278 | 35311.4 |
| adenylate cyclase | SAMN05444680_12441 | Not Available | Negative | 6754575 - 6756371 | 65095.6 |
| putative abc transport system substrate-binding protein | SAMN05444680_12442 | Not Available | Positive | 6756987 - 6758015 | 36814.5 |
| hypothetical protein | SAMN05444680_12443 | Not Available | Positive | 6758385 - 6758864 | 17080.2 |
| aminoacrylate hydrolase | SAMN05444680_12444 | Not Available | Negative | 6759297 - 6759692 | 14444.1 |
| tetratricopeptide repeat-containing protein | SAMN05444680_12445 | Not Available | Negative | 6759923 - 6760600 | 24488.0 |
| hypothetical protein | SAMN05444680_12446 | Not Available | Negative | 6760880 - 6761356 | 17976.2 |
| cache 3/cache 2 fusion domain-containing protein | SAMN05444680_12447 | Not Available | Negative | 6761811 - 6762299 | 17040.5 |
| hypothetical protein | SAMN05444680_12448 | Not Available | Negative | 6762815 - 6763009 | 7250.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
