Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpac | SAMN05444680_12419 | Not Available | Positive | 6731202 - 6732752 | 54557.5 |
| hypothetical protein | SAMN05444680_12420 | Not Available | Positive | 6732765 - 6733049 | 9850.83 |
| pilus assembly protein flp/pila | SAMN05444680_12421 | Not Available | Positive | 6733167 - 6733376 | 7179.78 |
| pilus assembly protein flp/pila | SAMN05444680_12422 | Not Available | Positive | 6733381 - 6733590 | 7024.64 |
| pilus assembly protein flp/pila | SAMN05444680_12423 | Not Available | Positive | 6733684 - 6733857 | 6101.78 |
| putative flp pilus-assembly tade/g-like | SAMN05444680_12424 | Not Available | Positive | 6733898 - 6735175 | 44154.1 |
| tade-like protein | SAMN05444680_12425 | Not Available | Positive | 6735180 - 6735629 | 16108.5 |
| flp pilus assembly protein tadg | SAMN05444680_12426 | Not Available | Positive | 6735626 - 6736057 | 15250.6 |
| pilus assembly protein cpae | SAMN05444680_12427 | Not Available | Positive | 6736077 - 6737228 | 41216.0 |
| pilus assembly protein cpaf | SAMN05444680_12428 | Not Available | Positive | 6737247 - 6738620 | 50628.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
