Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_12374 | Not Available | Negative | 6706870 - 6708117 | 45427.1 |
| hypothetical protein | SAMN05444680_12375 | Not Available | Positive | 6708451 - 6709185 | 27650.2 |
| putative ig domain-containing protein | SAMN05444680_1241 | Not Available | Positive | 6709591 - 6711525 | 65494.7 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444680_1242 | Not Available | Positive | 6712268 - 6712987 | 26438.6 |
| hypothetical protein | SAMN05444680_1243 | Not Available | Positive | 6713140 - 6713289 | 5511.65 |
| hypothetical protein | SAMN05444680_1244 | Not Available | Positive | 6713411 - 6714184 | 28024.6 |
| hypothetical protein | SAMN05444680_1245 | Not Available | Positive | 6714191 - 6714745 | 18751.8 |
| surface antigen | SAMN05444680_1246 | Not Available | Negative | 6715093 - 6715896 | 29323.7 |
| lipid-binding sylf domain-containing protein | SAMN05444680_1247 | Not Available | Negative | 6716381 - 6716941 | 19171.9 |
| protein of unknown function | SAMN05444680_1248 | Not Available | Negative | 6717264 - 6718160 | 32527.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
