Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05444680_12364 | Not Available | Negative | 6690682 - 6691620 | 34901.3 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_12365 | Not Available | Negative | 6691678 - 6692850 | 39781.6 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05444680_12366 | Not Available | Positive | 6693151 - 6694629 | 52721.6 |
| ornithine cyclodeaminase/alanine dehydrogenase | SAMN05444680_12367 | Not Available | Positive | 6694651 - 6695655 | 35252.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444680_12368 | Not Available | Positive | 6695690 - 6696700 | 37373.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12369 | Not Available | Positive | 6696697 - 6697716 | 36426.5 |
| alcohol dehydrogenase, class iv | SAMN05444680_12370 | Not Available | Positive | 6697801 - 6698787 | 34965.4 |
| hypothetical protein | SAMN05444680_12371 | Not Available | Positive | 6699064 - 6699168 | 3704.56 |
| dna-binding transcriptional regulator yiag, contains xre-type hth domain | SAMN05444680_12372 | Not Available | Negative | 6699436 - 6699864 | 15431.7 |
| hypothetical protein | SAMN05444680_12373 | Not Available | Negative | 6700044 - 6706553 | 236902.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
