Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444680_12354 | Not Available | Negative | 6680274 - 6681386 | 39958.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_12355 | Not Available | Negative | 6681416 - 6682417 | 36500.5 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_12356 | Not Available | Negative | 6682428 - 6683426 | 36630.6 |
| photosynthesis system ii assembly factor ycf48 | SAMN05444680_12357 | Not Available | Positive | 6684009 - 6684662 | 22334.7 |
| hypothetical protein | SAMN05444680_12358 | Not Available | Positive | 6684671 - 6687073 | 86147.1 |
| uncharacterized conserved protein, duf849 family | SAMN05444680_12359 | Not Available | Positive | 6687070 - 6687957 | 31295.9 |
| uncharacterized domain 1-containing protein | SAMN05444680_12360 | Not Available | Positive | 6687975 - 6688454 | 16397.8 |
| ribonuclease bn, trna processing enzyme | SAMN05444680_12361 | Not Available | Positive | 6688510 - 6689451 | 33939.8 |
| transcriptional regulator, tetr family | SAMN05444680_12362 | Not Available | Positive | 6689563 - 6690288 | 26635.2 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN05444680_12363 | Not Available | Negative | 6690311 - 6690679 | 13386.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
