Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101583 | Not Available | Negative | 608632 - 609138 | 18495.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_101584 | Not Available | Negative | 609188 - 610063 | 32441.9 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_101585 | Not Available | Negative | 610081 - 611133 | 37548.2 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_101586 | Not Available | Negative | 611145 - 612125 | 34657.1 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444680_101587 | Not Available | Negative | 612122 - 612850 | 26073.9 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444680_101588 | Not Available | Negative | 612847 - 613611 | 27338.3 |
| esterase phb depolymerase | SAMN05444680_101589 | Not Available | Negative | 613654 - 615126 | 50676.7 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_101590 | Not Available | Negative | 615313 - 616509 | 43099.2 |
| transcriptional regulator containing pas, aaa-type atpase, and dna-binding fis domains | SAMN05444680_101591 | Not Available | Negative | 616660 - 618189 | 55435.8 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444680_101592 | Not Available | Positive | 618400 - 619896 | 52162.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
