Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_12334 | Not Available | Positive | 6659446 - 6660261 | 29343.8 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444680_12335 | Not Available | Positive | 6660541 - 6661224 | 24935.1 |
| polar amino acid transport system permease protein | SAMN05444680_12336 | Not Available | Positive | 6661243 - 6661890 | 23751.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444680_12337 | Not Available | Positive | 6661874 - 6662602 | 26377.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_12338 | Not Available | Positive | 6662634 - 6663443 | 29078.2 |
| l-alanine-dl-glutamate epimerase | SAMN05444680_12339 | Not Available | Negative | 6663527 - 6664615 | 39300.3 |
| uronate dehydrogenase | SAMN05444680_12340 | Not Available | Negative | 6664612 - 6665466 | 30646.3 |
| galactarate dehydratase /l-talarate dehydratase | SAMN05444680_12341 | Not Available | Negative | 6665582 - 6666775 | 43985.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12342 | Not Available | Negative | 6666823 - 6667797 | 33935.9 |
| transcriptional regulator, laci family | SAMN05444680_12343 | Not Available | Positive | 6668027 - 6669046 | 36063.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
