Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_12324 | Not Available | Positive | 6649977 - 6650303 | 11891.7 |
| hypothetical protein | SAMN05444680_12325 | Not Available | Positive | 6650379 - 6651137 | 27127.2 |
| transcriptional regulator, iclr family | SAMN05444680_12326 | Not Available | Negative | 6651661 - 6653283 | 57513.0 |
| regulator of rnase e activity rraa | SAMN05444680_12327 | Not Available | Positive | 6653432 - 6654235 | 29335.2 |
| snoal-like domain-containing protein | SAMN05444680_12328 | Not Available | Positive | 6654250 - 6654699 | 17411.4 |
| nadp-dependent aldehyde dehydrogenase | SAMN05444680_12329 | Not Available | Positive | 6654703 - 6656121 | 48548.9 |
| stress responsive a/b barrel domain | SAMN05444680_12330 | Not Available | Positive | 6656115 - 6656411 | 11508.9 |
| udp-glucose 4-epimerase | SAMN05444680_12331 | Not Available | Positive | 6656446 - 6657489 | 38241.6 |
| l-lactate dehydrogenase | SAMN05444680_12332 | Not Available | Positive | 6657486 - 6658550 | 37293.9 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_12333 | Not Available | Positive | 6658603 - 6659430 | 29267.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
