Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter membrane protein 1, paat family | SAMN05444680_12314 | Not Available | Positive | 6638452 - 6639147 | 25651.0 |
| polar amino acid transport system permease protein | SAMN05444680_12315 | Not Available | Positive | 6639150 - 6639902 | 27242.2 |
| polar amino acid transport system atp-binding protein | SAMN05444680_12316 | Not Available | Positive | 6639910 - 6640656 | 27773.5 |
| rraa famliy | SAMN05444680_12317 | Not Available | Positive | 6640670 - 6641335 | 23714.4 |
| phage integrase family protein | SAMN05444680_12318 | Not Available | Positive | 6641724 - 6642431 | 26786.4 |
| site-specific recombinase xerd | SAMN05444680_12319 | Not Available | Positive | 6642424 - 6643419 | 37028.2 |
| transposase zinc-ribbon domain-containing protein | SAMN05444680_12320 | Not Available | Positive | 6643716 - 6644702 | 37095.7 |
| error-prone dna polymerase | SAMN05444680_12321 | Not Available | Positive | 6644777 - 6647959 | 117467.0 |
| replication region dna-binding n-term | SAMN05444680_12322 | Not Available | Positive | 6648291 - 6649346 | 38397.2 |
| hypothetical protein | SAMN05444680_12323 | Not Available | Positive | 6649448 - 6649612 | 6326.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
