Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_1234 | Not Available | Negative | 6625955 - 6626692 | 26215.2 |
| hypothetical protein | SAMN05444680_1235 | Not Available | Negative | 6626702 - 6627898 | 41360.2 |
| 6-phosphogluconolactonase, cycloisomerase 2 family | SAMN05444680_1236 | Not Available | Negative | 6627895 - 6628980 | 38453.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_1237 | Not Available | Positive | 6629072 - 6630055 | 34370.8 |
| dna-binding transcriptional regulator, gntr family | SAMN05444680_1238 | Not Available | Positive | 6630070 - 6630996 | 34977.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_1239 | Not Available | Positive | 6631207 - 6632205 | 35034.4 |
| aconitase | SAMN05444680_12310 | Not Available | Positive | 6632371 - 6635139 | 99197.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_12311 | Not Available | Negative | 6635328 - 6636248 | 34635.6 |
| aspartate aminotransferase | SAMN05444680_12312 | Not Available | Positive | 6636376 - 6637617 | 43999.9 |
| polar amino acid transport system substrate-binding protein | SAMN05444680_12313 | Not Available | Positive | 6637610 - 6638431 | 29388.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
