Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444680_12272 | Not Available | Positive | 6616772 - 6617710 | 34076.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12273 | Not Available | Negative | 6617697 - 6618671 | 34172.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12274 | Not Available | Negative | 6618789 - 6619757 | 32733.8 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444680_12275 | Not Available | Negative | 6619795 - 6620514 | 26629.8 |
| succinate semialdehyde dehydrogenase | SAMN05444680_12276 | Not Available | Negative | 6620533 - 6621993 | 51438.6 |
| 2-oxohept-3-enedioate hydratase | SAMN05444680_12277 | Not Available | Negative | 6622006 - 6622809 | 29583.5 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SAMN05444680_12278 | Not Available | Negative | 6622828 - 6623025 | 6710.85 |
| res domain-containing protein | SAMN05444680_1231 | Not Available | Negative | 6623346 - 6624005 | 24113.6 |
| hypothetical protein | SAMN05444680_1232 | Not Available | Negative | 6623998 - 6624621 | 22728.1 |
| hypothetical protein | SAMN05444680_1233 | Not Available | Positive | 6625291 - 6625410 | 4379.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
