Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-methylhydantoinase b | SAMN05444680_12262 | Not Available | Negative | 6605693 - 6607702 | 69807.6 |
| d-amino-acid dehydrogenase | SAMN05444680_12263 | Not Available | Negative | 6607708 - 6608943 | 45077.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_12264 | Not Available | Positive | 6609052 - 6609966 | 33413.5 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN05444680_12265 | Not Available | Positive | 6609984 - 6610454 | 17337.5 |
| shikimate dehydrogenase | SAMN05444680_12266 | Not Available | Positive | 6610507 - 6611358 | 29762.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_12267 | Not Available | Positive | 6611408 - 6612553 | 40347.5 |
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN05444680_12268 | Not Available | Positive | 6612583 - 6613584 | 35555.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_12269 | Not Available | Negative | 6613581 - 6614495 | 32160.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12270 | Not Available | Positive | 6614608 - 6615588 | 33488.8 |
| histidinol-phosphate aminotransferase | SAMN05444680_12271 | Not Available | Negative | 6615592 - 6616674 | 37982.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
