Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_12252 | Not Available | Positive | 6593057 - 6595006 | 67744.7 |
| 2-keto-4-pentenoate hydratase | SAMN05444680_12253 | Not Available | Negative | 6595066 - 6595821 | 26790.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12254 | Not Available | Negative | 6595818 - 6596795 | 34267.3 |
| alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase | SAMN05444680_12255 | Not Available | Negative | 6596832 - 6598073 | 44495.6 |
| dna-binding transcriptional regulator, gntr family | SAMN05444680_12256 | Not Available | Positive | 6598199 - 6598894 | 25979.4 |
| fad/fmn-containing dehydrogenase | SAMN05444680_12257 | Not Available | Positive | 6598906 - 6601947 | 109422.0 |
| protein of unknown function | SAMN05444680_12258 | Not Available | Negative | 6601944 - 6602531 | 20862.2 |
| homoserine dehydrogenase | SAMN05444680_12259 | Not Available | Positive | 6602849 - 6604210 | 47021.0 |
| reactive intermediate/imine deaminase | SAMN05444680_12260 | Not Available | Negative | 6604211 - 6604609 | 13586.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12261 | Not Available | Negative | 6604609 - 6605607 | 34770.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
