Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| farnesyl-diphosphate farnesyltransferase | SAMN05444680_101573 | Not Available | Positive | 597603 - 598442 | 31583.1 |
| squalene-associated fad-dependent desaturase | SAMN05444680_101574 | Not Available | Positive | 598711 - 599991 | 45278.4 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05444680_101575 | Not Available | Negative | 600010 - 601512 | 53950.1 |
| hypothetical protein | SAMN05444680_101576 | Not Available | Negative | 601529 - 602947 | 50783.0 |
| hypothetical protein | SAMN05444680_101577 | Not Available | Positive | 603530 - 605005 | 41975.9 |
| hypothetical protein | SAMN05444680_101578 | Not Available | Positive | 605102 - 605473 | 12453.9 |
| hypothetical protein | SAMN05444680_101579 | Not Available | Positive | 605484 - 606176 | 25643.2 |
| hypothetical protein | SAMN05444680_101580 | Not Available | Positive | 606176 - 606718 | 19064.7 |
| putative hydrolase of the had superfamily | SAMN05444680_101581 | Not Available | Negative | 606848 - 607579 | 26677.9 |
| ferrochelatase | SAMN05444680_101582 | Not Available | Positive | 607628 - 608638 | 37834.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
