Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like superfamily protein | SAMN05444680_12222 | Not Available | Negative | 6562087 - 6562584 | 18363.1 |
| putative abc transport system substrate-binding protein | SAMN05444680_12223 | Not Available | Positive | 6562933 - 6563826 | 31896.0 |
| hypothetical protein | SAMN05444680_12224 | Not Available | Negative | 6564048 - 6564764 | 25195.2 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444680_12225 | Not Available | Negative | 6565544 - 6566881 | 49185.2 |
| vanillin synthase /trans-feruloyl-coa hydratase | SAMN05444680_12226 | Not Available | Negative | 6566886 - 6567674 | 28671.7 |
| vanillate o-demethylase ferredoxin subunit | SAMN05444680_12227 | Not Available | Negative | 6567708 - 6568679 | 35033.4 |
| 5,5'-dehydrodivanillate o-demethylase | SAMN05444680_12228 | Not Available | Negative | 6568706 - 6569998 | 49530.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_12229 | Not Available | Negative | 6570018 - 6570992 | 34670.4 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_12230 | Not Available | Negative | 6571075 - 6572310 | 45669.4 |
| 4-oxalmesaconate hydratase | SAMN05444680_12231 | Not Available | Negative | 6572354 - 6573358 | 37653.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
