Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | SAMN05444680_12212 | Not Available | Negative | 6545417 - 6546520 | 38810.9 |
| d-serine/d-alanine/glycine:proton symporter, aat family | SAMN05444680_12213 | Not Available | Negative | 6546583 - 6548013 | 51205.7 |
| d-amino acid dehydrogenase small subunit | SAMN05444680_12214 | Not Available | Negative | 6548164 - 6549486 | 47958.9 |
| tyrr family helix-turn-helix domain-containing protein | SAMN05444680_12215 | Not Available | Positive | 6549746 - 6551281 | 54354.5 |
| hypothetical protein | SAMN05444680_12216 | Not Available | Positive | 6552206 - 6552460 | 9151.23 |
| mg2+-importing atpase | SAMN05444680_12217 | Not Available | Positive | 6552457 - 6555303 | 104439.0 |
| kup system potassium uptake protein | SAMN05444680_12218 | Not Available | Negative | 6555366 - 6557234 | 67100.1 |
| hypothetical protein | SAMN05444680_12219 | Not Available | Negative | 6558288 - 6559460 | 43255.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444680_12220 | Not Available | Positive | 6560028 - 6561014 | 36040.2 |
| tripartite tricarboxylate transporter family receptor | SAMN05444680_12221 | Not Available | Negative | 6561145 - 6561795 | 22985.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
